User-Level Workflow Design : A Bioinformatics Perspective

The continuous trend in computer science to lift programming to higher abstraction levels increases scalability and opens programming to a wider public. In particular, service-oriented programming and the support of semantics-based frameworks make application development accessible to users with alm...

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Další autoři: Lamprecht, Anna-Lena (Editor)
Korporace: SpringerLink (online služba)  
Médium: E-kniha
Jazyk:angličtina
Vydáno: Berlin ; Heidelberg : Springer Berlin Heidelberg, 2013
Edice:Lecture Notes in Computer Science
Žánr/forma:elektronické knihy
ISBN:978-3-642-45389-2
9783642453885
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On-line přístup:Plný text
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072 7 |a 004  |x Počítačová věda. Výpočetní technika. Informační technologie  |2 Konspekt  |9 23 
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505 0 |a The Bio-jETI Framework -- Phylogenetic Analysis Workflows -- GeneFisher-P -- FiatFlux-P -- Microarray Data Analysis Pipelines 
520 |a The continuous trend in computer science to lift programming to higher abstraction levels increases scalability and opens programming to a wider public. In particular, service-oriented programming and the support of semantics-based frameworks make application development accessible to users with almost no programming expertise. This monograph establishes requirement-centric scientific workflow design as an instance of consequent constraint-driven development. Requirements formulated in terms of user-level constraints are automatically transformed into running applications using temporal logic-based synthesis technology. The impact of this approach is illustrated by applying it to four very different bioinformatics scenarios: phylogenetic analysis, the dedicated GeneFisher-P scenario, the FiatFlux-P scenario, and microarray data analyses 
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